PUM2

PUM2
Available structures
PDB	Ortholog search: PDBe RCSB
List of PDB id codes
	3Q0Q, 3Q0R, 3Q0S
Identifiers
Aliases	PUM2, PUMH2, PUML2, pumilio RNA binding family member 2
External IDs	OMIM: 607205 MGI: 1931751 HomoloGene: 69183 GeneCards: PUM2
Gene location (Human)
Chr.	Chromosome 2 (human)
End	20,352,234 bp
Gene location (Mouse)
Chr.	Chromosome 12 (mouse)
End	8,802,581 bp
RNA expression pattern
	Top expressed in
	middle temporal gyrus; ; tibia; ; Achilles tendon; ; cerebellar vermis; ; ganglionic eminence; ; bronchial epithelial cell; ; amniotic fluid; ; hair follicle; ; thymus; ; postcentral gyrus;
	Top expressed in
	medial ganglionic eminence; ; Region I of hippocampus proper; ; foot; ; cingulate gyrus; ; ciliary body; ; entorhinal cortex; ; blood; ; thymus; ; iris; ; olfactory bulb;
	More reference expression data
	; ;
	More reference expression data
Gene ontology
Molecular function	protein binding; RNA binding; mRNA 3'-UTR binding; miRNA binding;
Cellular component	perinuclear region of cytoplasm; cytoplasmic stress granule; nuclear membrane; cytoplasm; cytosol;
Biological process	regulation of chromosome segregation; regulation of gene silencing by miRNA; positive regulation of RIG-I signaling pathway; regulation of translation; regulation of mRNA stability; positive regulation of gene silencing by miRNA; stress granule assembly; posttranscriptional regulation of gene expression; production of miRNAs involved in gene silencing by miRNA;
	Sources:Amigo / QuickGO
Orthologs
	23369
	80913
	ENSG00000055917
	ENSMUSG00000020594
	Q8TB72
	Q80U58
NM_001282752; NM_001282790; NM_001282791; NM_015317; NM_001352917;
	NM_001352918; NM_001352919; NM_001352920; NM_001352923; NM_001352925; NM_001352926; NM_001352927; NM_001352928; NM_001352929; NM_001352930
NM_001160219; NM_001160220; NM_001160221; NM_001160222; NM_030723;
	NM_001310519
NP_001269681; NP_001269719; NP_001269720; NP_056132; NP_001339846;
	NP_001339847; NP_001339848; NP_001339849; NP_001339852; NP_001339854; NP_001339855; NP_001339856; NP_001339857; NP_001339858; NP_001339859
NP_001153691; NP_001153692; NP_001153693; NP_001153694; NP_001297448;
	NP_109648
	Wikidata
View/Edit Human	View/Edit Mouse

Pumilio homolog 2 is an RNA-binding protein that in humans is encoded by the PUM2 gene.^[5]^[6]^[7]^[8]

Interactions edit

PUM2 has been shown to interact with the following proteins:

References edit

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000055917 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000020594 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ Nagase T, Seki N, Ishikawa K, Ohira M, Kawarabayasi Y, Ohara O, Tanaka A, Kotani H, Miyajima N, Nomura N (May 1997). "Prediction of the coding sequences of unidentified human genes. VI. The coding sequences of 80 new genes (KIAA0201-KIAA0280) deduced by analysis of cDNA clones from cell line KG-1 and brain". DNA Res. 3 (5): 321–9, 341–54. doi:10.1093/dnares/3.5.321. PMID 9039502.
^ Spassov DS, Jurecic R (Dec 2002). "Cloning and comparative sequence analysis of PUM1 and PUM2 genes, human members of the Pumilio family of RNA-binding proteins". Gene. 299 (1–2): 195–204. doi:10.1016/S0378-1119(02)01060-0. PMID 12459267.
^ Moore FL, Jaruzelska J, Fox MS, Urano J, Firpo MT, Turek PJ, Dorfman DM, Pera RA (Jan 2003). "Human Pumilio-2 is expressed in embryonic stem cells and germ cells and interacts with DAZ (Deleted in AZoospermia) and DAZ-Like proteins". Proc Natl Acad Sci U S A. 100 (2): 538–43. Bibcode:2003PNAS..100..538M. doi:10.1073/pnas.0234478100. PMC 141031. PMID 12511597.
^ "Entrez Gene: PUM2 pumilio homolog 2 (Drosophila)".
^ Campbell ZT, Menichelli E, Friend K, Wu J, Kimble J, Williamson JR, Wickens M (2012). "Identification of a conserved interface between PUF and CPEB proteins". J Biol Chem. 287 (22): 18854–62. doi:10.1074/jbc.M112.352815. PMC 3365739. PMID 22496444.
^ Ota R, Kotani T, Yamashita M (2011). "Biochemical characterization of Pumilio1 and Pumilio2 in Xenopus oocytes". J Biol Chem. 286 (4): 2853–63. doi:10.1074/jbc.M110.155523. PMC 3024781. PMID 21098481.
^ Haston KM, Tung JY, Reijo Pera RA (2009). "Dazl functions in maintenance of pluripotency and genetic and epigenetic programs of differentiation in mouse primordial germ cells in vivo and in vitro". PLOS ONE. 4 (5): e5654. Bibcode:2009PLoSO...4.5654H. doi:10.1371/journal.pone.0005654. PMC 2681483. PMID 19468308.
^ Geyer CB, Saba R, Kato Y, Anderson AJ, Chappell VK, Saga Y, Eddy EM (2012). "Rhox13 is translated in premeiotic germ cells in male and female mice and is regulated by NANOS2 in the male". Biol Reprod. 86 (4): 127. doi:10.1095/biolreprod.111.094938. PMC 3338663. PMID 22190708.

Further reading edit

Nakajima D, Okazaki N, Yamakawa H, Kikuno R, Ohara O, Nagase T (2003). "Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones". DNA Res. 9 (3): 99–106. doi:10.1093/dnares/9.3.99. PMID 12168954.
Spik A, Oczkowski S, Olszak A, Kotecki M, Formanowicz P, Błazewicz J, Jaruzelska J (2006). "Candidate mRNAs interacting with fertility protein PUMILIO2 in the human germ line". Reproductive Biology. 6 (Suppl 1): 37–42. PMID 16967088.
Nakayama M, Kikuno R, Ohara O (2003). "Protein–Protein Interactions Between Large Proteins: Two-Hybrid Screening Using a Functionally Classified Library Composed of Long cDNAs". Genome Res. 12 (11): 1773–84. doi:10.1101/gr.406902. PMC 187542. PMID 12421765.
Jaruzelska J, Kotecki M, Kusz K, Spik A, Firpo M, Reijo Pera RA (2004). "Conservation of a Pumilio-Nanos complex from Drosophila germ plasm to human germ cells". Dev. Genes Evol. 213 (3): 120–6. doi:10.1007/s00427-003-0303-2. PMID 12690449. S2CID 19186730.
Dazard JE, Gal H, Amariglio N, Rechavi G, Domany E, Givol D (2003). "Genome-wide comparison of human keratinocyte and squamous cell carcinoma responses to UVB irradiation: implications for skin and epithelial cancer". Oncogene. 22 (19): 2993–3006. doi:10.1038/sj.onc.1206537. PMID 12771951.
Beausoleil SA, Jedrychowski M, Schwartz D, Elias JE, Villén J, Li J, Cohn MA, Cantley LC, Gygi SP (2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins". Proc. Natl. Acad. Sci. U.S.A. 101 (33): 12130–5. Bibcode:2004PNAS..10112130B. doi:10.1073/pnas.0404720101. PMC 514446. PMID 15302935.
Fox M, Urano J, Reijo Pera RA (2005). "Identification and characterization of RNA sequences to which human PUMILIO-2 (PUM2) and deleted in Azoospermia-like (DAZL) bind". Genomics. 85 (1): 92–105. doi:10.1016/j.ygeno.2004.10.003. PMID 15607425.
Scott RE, White-Grindley E, Ruley HE, Chesler EJ, Williams RW (2005). "P2P-R expression is genetically coregulated with components of the translation machinery and with PUM2, a translational repressor that associates with the P2P-R mRNA". J. Cell. Physiol. 204 (1): 99–105. doi:10.1002/jcp.20263. PMID 15617101. S2CID 24888360.
Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, Mortensen P, Mann M (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983. S2CID 7827573.
Kusz K, Ginter-Matuszewska B, Ziolkowska K, Spik A, Bierla J, Jedrzejczak P, Latos-Bielenska A, Pawelczyk L, Jaruzelska J (2007). "Polymorphisms of the human PUMILIO2 gene and male sterility". Mol. Reprod. Dev. 74 (6): 795–9. doi:10.1002/mrd.20683. PMID 17154300. S2CID 6213126.

This article on a gene on human chromosome 2 is a stub. You can help Wikipedia by expanding it.

[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000055917 – Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000020594 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid9039502-5] Nagase T, Seki N, Ishikawa K, Ohira M, Kawarabayasi Y, Ohara O, Tanaka A, Kotani H, Miyajima N, Nomura N (May 1997). "Prediction of the coding sequences of unidentified human genes. VI. The coding sequences of 80 new genes (KIAA0201-KIAA0280) deduced by analysis of cDNA clones from cell line KG-1 and brain". DNA Res. 3 (5): 321–9, 341–54. doi:10.1093/dnares/3.5.321. PMID 9039502.

[pmid12459267-6] Spassov DS, Jurecic R (Dec 2002). "Cloning and comparative sequence analysis of PUM1 and PUM2 genes, human members of the Pumilio family of RNA-binding proteins". Gene. 299 (1–2): 195–204. doi:10.1016/S0378-1119(02)01060-0. PMID 12459267.

[pmid12511597-7] Moore FL, Jaruzelska J, Fox MS, Urano J, Firpo MT, Turek PJ, Dorfman DM, Pera RA (Jan 2003). "Human Pumilio-2 is expressed in embryonic stem cells and germ cells and interacts with DAZ (Deleted in AZoospermia) and DAZ-Like proteins". Proc Natl Acad Sci U S A. 100 (2): 538–43. Bibcode:2003PNAS..100..538M. doi:10.1073/pnas.0234478100. PMC 141031. PMID 12511597.

[entrez-8] "Entrez Gene: PUM2 pumilio homolog 2 (Drosophila)".

[9] Campbell ZT, Menichelli E, Friend K, Wu J, Kimble J, Williamson JR, Wickens M (2012). "Identification of a conserved interface between PUF and CPEB proteins". J Biol Chem. 287 (22): 18854–62. doi:10.1074/jbc.M112.352815. PMC 3365739. PMID 22496444.

[10] Ota R, Kotani T, Yamashita M (2011). "Biochemical characterization of Pumilio1 and Pumilio2 in Xenopus oocytes". J Biol Chem. 286 (4): 2853–63. doi:10.1074/jbc.M110.155523. PMC 3024781. PMID 21098481.

[11] Haston KM, Tung JY, Reijo Pera RA (2009). "Dazl functions in maintenance of pluripotency and genetic and epigenetic programs of differentiation in mouse primordial germ cells in vivo and in vitro". PLOS ONE. 4 (5): e5654. Bibcode:2009PLoSO...4.5654H. doi:10.1371/journal.pone.0005654. PMC 2681483. PMID 19468308.

[12] Geyer CB, Saba R, Kato Y, Anderson AJ, Chappell VK, Saga Y, Eddy EM (2012). "Rhox13 is translated in premeiotic germ cells in male and female mice and is regulated by NANOS2 in the male". Biol Reprod. 86 (4): 127. doi:10.1095/biolreprod.111.094938. PMC 3338663. PMID 22190708.

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