| Flinders Street Viaduct | | to Flinders Street |
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| Inner Circle Line | | to Domain |
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0.0 km
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Southern Cross (SSS)
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Free Zone
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| City Loop Line
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| Metro Rail Tunnel 3 | | to Newport |
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| Dynon Overpass
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| Inner Circle Line | | to Royal Park |
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| Essendon Line | | to Pascoe Vale |
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| Williamstown Line | | to Williamstown |
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5.6 km
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Footscray (FSY)
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Zone 1/2
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| Banbury Street Tunnel
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| Tottenham Depot
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| Sunshine-Newport Line | | to Brooklyn and Newport |
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12.3 km
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Sunshine (SSY)
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Zone 2/3
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| Bendigo Line | | to Gisborne and Bendigo |
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| Bulla Central Line | | to Bulla |
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| Quandong Line | | to Quandong Central |
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17.9 km
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Deer Park (DEK)
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Zone 3/4
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| Regional Rail Link | | to Manor |
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21.2 km
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Burnside (CNS)
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Zone 3/4
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24.6 km
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Hopkins (HPK)
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Zone 4
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| Ballarat Line | | to Ballarat and Baccus Marsh |
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28.7 km
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Fieldstone (FIE)
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Zone 4
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31.6 km
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Mount Cottrell (MCO)
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Zone 4
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| Eynesbury Line | | to Eynesbury and Brooklyn |
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34.8 km
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Chartwell (CTW)
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Zone 4/5
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37.8 km
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Riverstone (RST)
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Zone 4/5
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| Quandong Line | | to Quandong and Ardeer |
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39.5 km
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Spring Plains (SPS)
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Zone 5
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41.4 km
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Holyoake (HOO)
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Zone 5
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| Wyndham Line | | to Laverton North |
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44.3 km
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Manor Lakes (MLA)
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Zone 5
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48.1 km
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Mambourin (MMN)
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Zone 5
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51.2 km
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Mambourin Village (MMV)
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Zone 5
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| Geelong Line | | to Werribee and Newport |
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59.2 km
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Little River (LTR)
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Zone 5
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66.6 km
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Avalon Airport (AAP)
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Zone 6
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continues to Avalon Point
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