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edit- Bottomly has been both editor and associate editor of the medical journal, Immunity (journal), and a section editor and associate editor of the Journal of Immunology.
- Professional societies that Bottomly is a member of include:
- American Association for the Advancement of Science
- American Association of Immunologists, where she has served on and chaired many elected and appointed committees.
- She has chaired the Committee on Status of Women of the American Association of Immunologists and the Women's Committee of the Federation of American Societies of Experimental Biologists.
- She has been a member of the steering committee of Yale’s Women Faculty Forum.
- She was elected to the 229th class of the prestigious honorary society and center for policy research, the American Academy of Arts and Sciences, in 2009.
- Bottomly serves as an Institutional Trustee at WGBH, a public television and radio station in Boston, Massachusetts.
- Fulbright University Vietnam announced June 6, 2019, that Bottomly, who served as chairman of the Fulbright University Vietnam Board of Trustees since January 2018, had stepped down.