User:Plindenbaum/Editing Wikipedia for Academics

Edit wikipedia for academics ...

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See Help:Logging_in#Creating_an_account.

(Optional) Create a user page

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see Wikipedia:User_pages

Add your Template:User_ORCID id in your page:

{{User ORCID|0000-0001-5882-6823}}


Create the article

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start a new article, if it's missing. see Wikipedia:Your_first_article

http://biogps.org/ can be used to generated an article from a Gene-ID.[1]

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See Help:Link

[[Rotavirus]] [[RNA-binding protein]] [[NSP3(Rotavirus)|NSP3]]
interacts with [[Eukaryotic initiation factor|eIF4GI]]

Add References

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Cite your references using an inline citation (see Wikipedia:Inline_citation, Help:Referencing_for_beginners). For example:

...it was established that the minimal RNA sequence required for binding of
NSP3A is '''GACC'''.<ref name=pmid8076612>{{cite journal |pmid=8076612 |year=1994|
last1=Poncet |first1=D |last2=Laurent |last3=Cohen |title=Four nucleotides are the
minimal requirement for RNA recognition by rotavirus non-structural protein NSP3 |
volume=13 |issue=17 |pages=4165–73 |journal=The EMBO Journal |pmc=395339 |format=
Free full text |first2=S |first3=J}}</ref>


A <ref></ref> can be generated from a PMID with http://neuro.imm.dtu.dk/cgi-bin/brede_bib_pmid2wpcitejournal.py?pmid=

at the end of your article add the <references /> tag

(...)
= References =
<references />


edit

Add a semantic link using the Template:SWL template.[2]

example:

Mutations in [[FAM136A|FAM136A]] are associated to
{{SWL|type=mutations_associated_to|target=Meniere's disease|label=Meniere's disease}}.
<ref>{{Cite pmid|25305078}}</ref>

Add infoboxes

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see Help:Infobox

e.g: Jim Kent

{{Infobox scientist
| name              = Jim Kent
| image             = Jim Kent.JPG
| image_size        = 
| alt               = 
| caption           =  'Photo courtesy of Jim Kent.
| birth_date        =  {{birth date and age|1960|2|10}}
| birth_place       = [[Hawaii]]
| death_date        = <!-- {{Death date and age|YYYY|MM|DD|YYYY|MM|DD}} (death date then birth date) -->
| death_place       = 
| resting_place             = 
| resting_place_coordinates = <!-- {{Coord|LAT|LONG|type:landmark|display=inline,title}} -->
| residence         = 
| citizenship       = 
| nationality       = [[United States]]
| fields            = 
| workplaces        = 
| alma_mater        = [[University of California, Santa Cruz]]
| thesis_title      = Patching and painting the working draft of the human genome
| thesis_url        = http://search.proquest.com/docview/252090457/
| thesis_year       = 2002
| doctoral_advisor  = Alan M Zahler
| academic_advisors = [[David Haussler]]<ref>{{cite doi|10.1371/journal.pgen.1003282}}</ref>
(....)
}}


e.g: DbSNP

{{infobox biodatabase
|title = dbSNP
|logo =[[File:US-NLM-NCBI-Logo.svg|60px]]
|description = [[Single-nucleotide polymorphism|Single Nucleotide Polymorphism]] [[Database]]
|scope =
|organism = all
|center =[[National Center for Biotechnology Information]]
|laboratory = 
|author =
|pmid = PMID 21097890
|released = 1998
|standard =
|format =[[ASN.1]], [[Fasta]], [[XML]]
|url = {{URL|http://www.ncbi.nlm.nih.gov/projects/SNP/}}
|download =ftp://ftp.ncbi.nih.gov/snp/
|webservice =[http://eutils.ncbi.nlm.nih.gov EUtils]<br/>[http://eutils.ncbi.nlm.nih.gov/soap/v2.0/eutils.wsdl SOAP]
(...)
}}

e.g: Aspirin

{{Infobox drug
| Watchedfields = changed
| verifiedrevid = 464364671
| IUPAC_name = 2-(acetoxy)benzoic acid <!-- per ChemSpider -->
| OtherNames = Acetylsalicylic acid
| image = Aspirin-skeletal.svg
| image2 = Aspirin-B-3D-balls.png
(...)


Add categories

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Add categories at the bottom of the article.

e.g: Charles Darwin:

[[Category:1809 births]]
[[Category:1882 deaths]]
[[Category:19th-century English writers]]
[[Category:19th-century scientists]]


e.g: Roxan_(protein):

[[Category:Gene expression]]
[[Category:RNA-binding proteins]]
[[Category:Rotaviruses]]
[[Category:TPR domain]]

e.g: Spirometra erinaceieuropaei

[[Category:Cestoda]]
[[Category:Parasitic animals]]
[[Category:Animals with sequenced genomes]]
[[Category:Zoonoses]]


References

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  1. ^ Chunlei Wu, Ian Macleod & Andrew I. Su (January 2013). "BioGPS and MyGene.info: organizing online, gene-centric information". Nucleic Acids Research. 41 (Database issue): D561–D565. doi:10.1093/nar/gks1114. PMC 3531157. PMID 23175613.{{cite journal}}: CS1 maint: date and year (link)
  2. ^ Benjamin M. Good, Erik L. Clarke, Salvatore Loguercio & Andrew I. Su (2012). "Building a biomedical semantic network in Wikipedia with Semantic Wiki Links". Database : the journal of biological databases and curation. 2012: bar060. doi:10.1093/database/bar060. PMC 3308151. PMID 22434829.{{cite journal}}: CS1 maint: multiple names: authors list (link)