Hi I just discovered the power of HTML and PHP.

I found that the Graphviz may help to make a "expert system" or knowledge database.. anyway to help in esp Biological or Medical research~

Oh... I am a science and medical student~

Pls figure out wiki and Graphviz yourself.

Here 's my idea:

Let say researcher 1 made an experiment and input a manuscript etcetc and FINALLY he enter the SUMMARY as a Graphviz code:

Experiment A:

digraph ID060101 { IFNalpha1 -> IFNAR [label="binds"] }

expA.png

The same applies to researcher 2

Exp B:

digraph ID060101 { IFNalpha11 -> IFNAR [label="binds"] }

expB.png

Now u search: IFNAR In the database you will find: IFNalpha11 -> IFNAR [label="binds"] IFNalpha1 -> IFNAR [label="binds"]

Then it will be easy for a script to make the graph from them use this:

digraph query { IFNalpha11 -> IFNAR [label="binds"] IFNalpha1 -> IFNAR [label="binds"] }


expC.png


I think this is very much useful if you wanna to know the "whole picture" of something esp when I face in biochemistry or medicine.

The graphviz did apply extra that can further tune the above, say making "set" "compartments" etc. Also kinetics or functional or structural relationship may be separately annotated making it useful for quantitative annotation for numerical analysis. Ofcoz too the "level" of depth should be able to be chosen~

My email is bchlawrence@126.com

I myself didn't have too much time for HTML and PHP, and these 2 are only thing necessary for this. If I later start a project on this I'll call it Bio-SWIM, Smart Wiki Infomation Management~

Anyone interested pls email me!

I do believe this help much, didn't u?


Oh I made this page in... 2006 Jan 26~


Oh, the adv by a publisher is charming~

We salute you. The scientists who light the way,...

We salute you. The scientists who never stop searching,...