Draft:Peptacetobacter genetic code

Submission declined on 3 September 2024 by IntentionallyDense (talk).

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Declined by IntentionallyDense 57 days ago. Last edited by IntentionallyDense 57 days ago. Reviewer: Inform author.

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The Peptacetobacter genetic code (tentative code number 35) translates CGG to glutamine, as determined by the codon assignment software Codetta^[1]; it was further shown that this recoding is associated with a special tRNA with the appropriate anticodon and tRNA identity elements. As currently known, this code is limited to the genus Peptacetobacter as defined by the GTDB taxonomy system ^[2] release 220. Codetta called the Peptacetobacter code for the following genome assemblies: GCA_000156055.1, GCA_008151785.1, GCA_902373785.1, GCA_900539645.1, and GCA_003478825.1.

References

^ Shulgina, Yekaterina; Eddy, Sean R. (9 November 2021). "A computational screen for alternative genetic codes in over 250,000 genomes". eLife. 10. doi:10.7554/eLife.71402. PMC 8629427. PMID 34751130.
^ Parks, Donovan H.; Chuvochina, Maria; Chaumeil, Pierre-Alain; Rinke, Christian; Mussig, Aaron J.; Hugenholtz, Philip (September 2020). "A complete domain-to-species taxonomy for Bacteria and Archaea". Nature Biotechnol. 38 (9): 1079–1086. doi:10.1038/s41587-020-0501-8. PMID 32341564.

[Shulgina-1] Shulgina, Yekaterina; Eddy, Sean R. (9 November 2021). "A computational screen for alternative genetic codes in over 250,000 genomes". eLife. 10. doi:10.7554/eLife.71402. PMC 8629427. PMID 34751130.

[GTDB-2] Parks, Donovan H.; Chuvochina, Maria; Chaumeil, Pierre-Alain; Rinke, Christian; Mussig, Aaron J.; Hugenholtz, Philip (September 2020). "A complete domain-to-species taxonomy for Bacteria and Archaea". Nature Biotechnol. 38 (9): 1079–1086. doi:10.1038/s41587-020-0501-8. PMID 32341564.

[1]

[2]

Draft:Peptacetobacter genetic code

See also

References