File:Pleiotropic overlap between polygenic predictors (in variance accounted for).svg

Original file(SVG file, nominally 1,749 × 1,749 pixels, file size: 601 KB)

Summary

Description
English: This table shows one measure of pleiotropy for many human traits. A polygenic predictor was trained on each trait and the overlap of the selected SNPs for each pair of predictors illustrated. The larger magnitude of overlap, i.e., pleiotropy, the more intense color in the table. Technically, it shows the pairwise overlap between predictors in terms of the variance accounted for by predictor SNPs in common, expressed as a percentage of the total variance accounted for by the SNPs belonging to the predictor for the condition labelling each row. The overlapping variance is weighted according to the sign of the correlation between each pair of associated SNPs 4000 kilo base pairs or less apart. This can cause diagonal elements to be less than one hundred percent, as anti-correlated SNPs may be included in the overlap calculation.
Date
Source Yong, S.Y., Raben, T.G., Lello, L. et al. Genetic architecture of complex traits and disease risk predictors. Sci Rep 10, 12055 (2020). https://doi.org/10.1038/s41598-020-68881-8
Author Yong, S.Y., Raben, T.G., Lello, L., Hsu, S.D.

Licensing

w:en:Creative Commons
attribution share alike
This file is licensed under the Creative Commons Attribution-Share Alike 4.0 International license.
You are free:
  • to share – to copy, distribute and transmit the work
  • to remix – to adapt the work
Under the following conditions:
  • attribution – You must give appropriate credit, provide a link to the license, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use.
  • share alike – If you remix, transform, or build upon the material, you must distribute your contributions under the same or compatible license as the original.

Captions

Pleiotropy seems limited for many traits in humans since the SNP overlap, as measured by variance accounted for, between many polygenic predictors is small.

Items portrayed in this file

depicts

21 July 2020

image/svg+xml

File history

Click on a date/time to view the file as it appeared at that time.

Date/TimeThumbnailDimensionsUserComment
current12:54, 23 July 2021Thumbnail for version as of 12:54, 23 July 20211,749 × 1,749 (601 KB)Stal potatenUploaded a work by Yong, S.Y., Raben, T.G., Lello, L., Hsu, S.D. from Yong, S.Y., Raben, T.G., Lello, L. et al. Genetic architecture of complex traits and disease risk predictors. Sci Rep 10, 12055 (2020). https://doi.org/10.1038/s41598-020-68881-8 with UploadWizard
The following pages on the English Wikipedia use this file (pages on other projects are not listed):

Global file usage

The following other wikis use this file:

Metadata