In taxonomy, Methanococcoides is a genus of the Methanosarcinaceae.[1]
| Methanococcoides | |
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| Genus: | Methanococcoides Sowers and Ferry 1985
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| Type species | |
| Methanococcoides methylutens Sowers and Ferry 1985
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Methanococcoides species are methanogens entirely dependent on methylated compounds for nutrition. The type species of Methanococcoides is Methanococcoides methylutens.[2][3]
Phylogeny edit
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[4] and National Center for Biotechnology Information (NCBI).[1]
| 16S rRNA based LTP_06_2022[5][6][7] | 53 marker proteins based GTDB 08-RS214[8][9][10] | ||||||||||||||||||||||||||||||||||||||||||||||||
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See also edit
References edit
- ^ a b Sayers; et al. "Methanococcoides". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-06-05.
- ^ Yue Guan; David K. Ngugi; Jochen Blom; Shahjahan Ali; James G. Ferry; Ulrich Stingl (20 November 2014). "Draft Genome Sequence of an Obligately Methylotrophic Methanogen, Methanococcoides methylutens, Isolated from Marine Sediment". Genome Announcements. 2 (6): e01184-14. doi:10.1128/genomeA.01184-14. PMC 4239356. PMID 25414501.
- ^ D.R. Boone; et al. (2001). "Bergey's Manual of Systematic Bacteriology" (ed.). Order III: methanosarcinales (vol. 1, 2nd ed.). New York: Springer.
- ^ J.P. Euzéby. "Methanococcoides". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2021-11-17.
- ^ "The LTP". Retrieved 10 May 2023.
- ^ "LTP_all tree in newick format". Retrieved 10 May 2023.
- ^ "LTP_06_2022 Release Notes" (PDF). Retrieved 10 May 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "ar53_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
Further reading edit
- Springer E; Sachs MS; Woese CR; Boone DR (1995). "Partial gene sequences for the A subunit of methyl-coenzyme M reductase (mcrI) as a phylogenetic tool for the family Methanosarcinaceae". Int. J. Syst. Bacteriol. 45 (3): 554–559. doi:10.1099/00207713-45-3-554. PMID 8590683.
- Sowers KR; Johnson JL; Ferry JG (1984). "Phylogenic relationships among the methylotrophic methane-producing bacteria and emendation of the family Methanosarcinaceae". Int. J. Syst. Bacteriol. 34 (4): 444–450. doi:10.1099/00207713-34-4-444.
- Sowers KR; Ferry JG (1983). "Isolation and characterization of a methylotrophic marine methanogen, Methanococcoides methylutens gen. nov., sp. nov". Appl. Environ. Microbiol. 45 (2): 684–690. Bibcode:1983ApEnM..45..684S. doi:10.1128/AEM.45.2.684-690.1983. PMC 242344. PMID 16346215.
- Balch WE; Fox GE; Magrum LJ; Woses CR; et al. (1979). "Methanogens: reevaluation of a unique biological group". Microbiol. Rev. 43 (2): 260–296. doi:10.1128/MMBR.43.2.260-296.1979. PMC 281474. PMID 390357.
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