Oligogalacturonate-specific porin

Oligogalacturonate-specific porins (KdgM) are a family of outer bacterial membrane proteins from Dickeya dadantii. The phytopathogenic Gram-negative bacteria D. dadantii secretes pectinases, which are able to degrade the pectic polymers of plant cell walls, and uses the degradation products as a carbon source for growth. Synthesis of KdgM is strongly induced in the presence of pectic derivatives. KdgM behaves like a voltage-dependent porin that is slightly selective for anions and that exhibits fast block in the presence of trigalacturonate. KdgM seems to be monomeric.[1]

KdgM
Identifiers
SymbolKdgM
PfamPF06178
Pfam clanCL0193
InterProIPR009331
TCDB1.B.35
OPM superfamily206
OPM protein2wjr
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary

References edit

  1. ^ Blot N, Berrier C, Hugouvieux-Cotte-Pattat N, Ghazi A, Condemine G (March 2002). "The oligogalacturonate-specific porin KdgM of Erwinia chrysanthemi belongs to a new porin family". J. Biol. Chem. 277 (10): 7936–44. doi:10.1074/jbc.M109193200. PMID 11773048.
This article incorporates text from the public domain Pfam and InterPro: IPR009331