Lignin(Redirected from Lignified)
Lignin is a class of complex organic polymers that form important structural materials in the support tissues of vascular plants and some algae. Lignins are particularly important in the formation of cell walls, especially in wood and bark, because they lend rigidity and do not rot easily. Chemically, lignins are cross-linked phenolic polymers.
An example of a possible lignin structure
Except where otherwise noted, data are given for materials in their standard state (at 25 °C [77 °F], 100 kPa).
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Lignin was first mentioned in 1813 by the Swiss botanist A. P. de Candolle, who described it as a fibrous, tasteless material, insoluble in water and alcohol but soluble in weak alkaline solutions, and which can be precipitated from solution using acid. He named the substance “lignine”, which is derived from the Latin word lignum, meaning wood. It is one of the most abundant organic polymers on Earth, exceeded only by cellulose. Lignin constitutes 30% of non-fossil organic carbon and 20-35% of the dry mass of wood. The Carboniferous Period (geology) is in part defined by the evolution of lignin.
Composition and structureEdit
The lignols that crosslink are of three main types, all derived from phenylpropane: 4-hydroxy-3-methoxyphenylpropane, 3,5-dimethoxy-4-hydroxyphenylpropane, and 4-hydroxyphenylpropane. The former tends to be more prevalent in conifers and the latter in hardwoods.
Lignin is a cross-linked polymer with molecular masses in excess of 10,000 u. It is relatively hydrophobic and rich in aromatic subunits. The degree of polymerisation is difficult to measure, since the material is heterogeneous. Different types of lignin have been described depending on the means of isolation.
Three monolignol monomers are precursors, all of which are methoxylated to various degrees: p-coumaryl alcohol, coniferyl alcohol, and sinapyl alcohol (Figure 3). These lignols are incorporated into lignin in the form of the phenylpropanoids p-hydroxyphenyl (H), guaiacyl (G), and syringyl (S), respectively. Gymnosperms have a lignin that consists almost entirely of G with small quantities of H. That of dicotyledonous angiosperms is more often than not a mixture of G and S (with very little H), and monocotyledonous lignin is a mixture of all three. Many grasses have mostly G, while some palms have mainly S. All lignins contain small amounts of incomplete or modified monolignols, and other monomers are prominent in non-woody plants.
Lignin fills the spaces in the cell wall between cellulose, hemicellulose, and pectin components, especially in vascular and support tissues: xylem tracheids, vessel elements and sclereid cells. It is covalently linked to hemicellulose and therefore cross-links different plant polysaccharides, conferring mechanical strength to the cell wall and by extension the plant as a whole. It is particularly abundant in compression wood but scarce in tension wood, which are types of reaction wood.
Lignin plays a crucial part in conducting water in plant stems. The polysaccharide components of plant cell walls are highly hydrophilic and thus permeable to water, whereas lignin is more hydrophobic. The crosslinking of polysaccharides by lignin is an obstacle for water absorption to the cell wall. Thus, lignin makes it possible for the plant's vascular tissue to conduct water efficiently. Lignin is present in all vascular plants, but not in bryophytes, supporting the idea that the original function of lignin was restricted to water transport. However, it is present in red algae, which seems to suggest that the common ancestor of plants and red algae also synthesised lignin. This would suggest that its original function was structural; it plays this role in the red alga Calliarthron, where it supports joints between calcified segments. Another possibility is that the lignins in red algae and in plants are result of convergent evolution and not of a common origin.
Global commercial production of lignin is a consequence of papermaking. Illustrative of the scale of the process, in 1988, >220 million tons of paper was produced worldwide. Much of this paper was delignified, Lignin comprises about 1/3 of the mass of lignocellulose, the precursor to paper. It can thus be seen that lignin is handled on a very large scale. Lignin is an impediment to papermaking as it is colored, it yellows in ligand, and its presence weakens the paper. Once separated from the cellulose, it is burned as fuel. Only a fraction is used in a wide range of low volume applications where the form but not the quality is important.
Mechanical, or high-yield pulp, which is used to make newsprint, contains most of the lignin originally present in the wood. This lignin is responsible for newsprint's yellowing with age. High quality paper requires the removal of lignin from the pulp. These delignification processes are core technologies of the papermaking industry as well as the source of significant environmental concerns.
In sulfite pulping, lignin is removed from wood pulp as lignosulfonates, for which many applications have been proposed. They are used as dispersants, humectants, emulsion stabilizers, and sequestrants (water treatment).
Lignin removed by the kraft process is usually burned for its fuel value, providing energy to power the mill. Three commercial processes exist to remove lignin from black liquor for higher value uses: LignoBoost (Sweden), LignoForce (Canada), and SLRP (US). Higher quality lignin presents the potential to become a renewable source of aromatic compounds for the chemical industry, with an addressable market of more than $130bn.
Lignin biosynthesis (Figure 4) begins in the cytosol with the synthesis of glycosylated monolignols from the amino acid phenylalanine. These first reactions are shared with the phenylpropanoid pathway. The attached glucose renders them water-soluble and less toxic. Once transported through the cell membrane to the apoplast, the glucose is removed, and the polymerisation commences. Much about its anabolism is not understood even after more than a century of study.
The polymerisation step, that is a radical-radical coupling, is catalysed by oxidative enzymes. Both peroxidase and laccase enzymes are present in the plant cell walls, and it is not known whether one or both of these groups participates in the polymerisation. Low molecular weight oxidants might also be involved. The oxidative enzyme catalyses the formation of monolignol radicals. These radicals are often said to undergo uncatalyzed coupling to form the lignin polymer, but this hypothesis has been recently challenged. The alternative theory that involves an unspecified biological control is however not widely accepted.
Lignin is a recalcitrant biopolymer, meaning that it resists degradation. Recalcitrance is manifested in resistance to acid- and base-catalyzed hydrolysis. In contrast, other biopolymers - proteins, DNA, and even cellulose - degrade when treated with aqueous acids or bases. Lignin's recalcitrance varies with species and plant tissue type. For example, syringyl (S) lignol is more susceptible to degradation by fungal decay as it has fewer aryl-aryl bonds and a lower redox potential than guaiacyl units. Because it is cross-linked with the other cell wall components, lignin minimizes the accessibility of cellulose and hemicellulose to microbial enzymes, leading to a reduced digestibility of biomass.
Some ligninolytic enzymes include heme peroxidases such as lignin peroxidases, manganese peroxidases, versatile peroxidases, and dye-decolourizing peroxidases as well as copper-based laccases. Lignin peroxidases oxidize non-phenolic lignin, whereas manganese peroxidases only oxidize the phenolic structures. Dye-decolorizing peroxidases, or DyPs, exhibit catalytic activity on a wide range of lignin model compounds, but their in vivo substrate is unknown. In general, laccases oxidize phenolic substrates but some fungal laccases have been shown to oxidize non-phenolic substrates in the presence of synthetic redox mediators.
Lignin degradation by fungiEdit
Well-studied ligninolytic enzymes are found in Phanerochaete chrysosporium and other white rot fungi. Some white rot fungi, such as C. subvermispora, can degrade the lignin in lignocellulose, but others lack this ability. Most fungal lignin degradation involves secreted peroxidases. Many fungal laccases are also secreted, which facilitate degradation of phenolic lignin-derived compounds, although several intracellular fungal laccases have also been described. An important aspect of fungal lignin degradation is the activity of accessory enzymes to produce the H2O2 required for the function of lignin peroxidase and other heme peroxidases.
Lignin degradation by bacteriaEdit
Bacteria lack most of the enzymes employed in fungal lignin degradation. The ligninolytic activity of bacteria has not been studied extensively even though it was first described in 1930. Many bacterial DyPs have been characterized. Bacteria do not express any of the plant-type peroxidases (lignin peroxidase, Mn peroxidase, or versatile peroxidases), but three of the four classes of DyP are only found in bacteria. In contrast to fungi, most bacterial enzymes involved in lignin degradation are intracellular, including two classes of DyP and most bacterial laccases.
Pyrolysis of lignin during the combustion of wood or charcoal production yields a range of products, of which the most characteristic ones are methoxy-substituted phenols. Of those, the most important are guaiacol and syringol and their derivatives. Their presence can be used to trace a smoke source to a wood fire. In cooking, lignin in the form of hardwood is an important source of these two compounds, which impart the characteristic aroma and taste to smoked foods such as barbecue. The main flavor compounds of smoked ham are guaiacol, and its 4-, 5-, and 6-methyl derivatives as well as 2,6-dimethylphenol. These compounds are produced by thermal breakdown of lignin in the wood used in the smokehouse.
The conventional method for lignin quantitation in the pulp industry is the Klason lignin and acid-soluble lignin test, which is standardized according to TAPPI or NREL procedure. The cellulose is first decrystallized and partially depolymerized into oligomers by keeping the sample in 72% sulfuric acid at 30 C for 1 h. Then, the acid is diluted to 4% by adding water, and the depolymerization is completed by either boiling (100 °C) for 4 h or pressure cooking at 2 bar (124 °C) for 1 h. The acid is washed out and the sample dried. The residue that remains is termed Klason lignin. A part of the lignin, acid-soluble lignin (ASL) dissolves in the acid. ASL is quantified by the intensity of its UV absorption peak at 280 nm. The method is suited for wood lignins, but not equally well for varied lignins from different sources. The carbohydrate composition may be also analyzed from the Klason liquors, although there may be sugar breakdown products (furfural and 5-hydroxymethylfurfural).
A solution of hydrochloric acid and phloroglucinol is used for the detection of lignin (Wiesner test). A brilliant red color develops, owing to the presence of coniferaldehyde groups in the lignin.
Thermochemolysis (chemical break down of a substance under vacuum and at high temperature) with tetramethylammonium hydroxide (TMAH) has also been used to analyse the ratios of lignols with fungal decay as well the ratio of the carboxylic acid (Ad) to aldehyde (Al) forms of the lignols (Ad/Al). Increases in the (Ad/Al) value indicate an oxidative cleavage reaction has occurred on the alkyl lignin side chain which has been shown to be a step in the decay of wood by many white-rot and some soft rot fungi.
Solid state 13C NMR has been used to look at the concentrations of lignin, as well as other major components in wood e.g. cellulose, and how that changes with microbial decay. Conventional solution-state NMR for lignin is possible. However, many intact lignins have a crosslinked, very high molar-mass fraction that is difficult to dissolve even for functionalization.
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