IQ calmodulin-binding motif

The IQ calmodulin-binding motif is an amino acid sequence motif containing the following sequence:

  • [FILV]Qxxx[RK]Gxxx[RK]xx[FILVWY]
IQ calmodulin-binding motif
Structure of the regulatory domain of scallop myosin at 2 A resolution.[1]
Identifiers
SymbolIQ
PfamPF00612
InterProIPR000048
SMARTSM00015
PROSITEPS50096
SCOP21wdc / SCOPe / SUPFAM
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary
PDB1b7t​, 1br1​, 1br2​, 1br4​, 1d0x​, 1d0y​, 1d0z​, 1d1a​,1d1b​,1d1c​, 1dfk​, 1dfl​, 1fmv​, 1fmw​, 1jwy​, 1jx2​, 1kk7​, 1kk8​,1kqm​, 1kwo​, 1l2o​, 1lkx​, 1lvk​, 1mma​, 1mmd​, 1mmg​, 1mmn​,1mnd​, 1mne​, 1oe9​, 1qvi​, 1s5g​, 1scm​, 1sr6​, 1vom​, 1w7i​,1w7j​, 1wdc​, 2mys

The term "IQ" refers to the first two amino acids of the motif: isoleucine (commonly) and glutamine (invariably).

Function edit

Calmodulin (CaM) is recognized as a major calcium (Ca2+) sensor and orchestrator of regulatory events through its interaction with a diverse group of cellular proteins. Three classes of recognition motifs exist for many of the known CaM binding proteins; the IQ motif as a consensus for Ca2+-independent binding and two related motifs for Ca2+-dependent binding, termed 1-14 and 1-5-10 based on the position of conserved hydrophobic residues.[2]

Example edit

The regulatory domain of scallop myosin is a three-chain protein complex that switches on this motor in response to Ca2+ binding. Side-chain interactions link the two light chains in tandem to adjacent segments of the heavy chain bearing the IQ-sequence motif. The Ca2+-binding site is a novel EF hand motif on the essential light chain and is stabilized by linkages involving the heavy chain and both light chains, accounting for the requirement of all three chains for Ca2+binding and regulation in the intact myosin molecule.[3]

References edit

  1. ^ Houdusse A, Cohen C (January 1996). "Structure of the regulatory domain of scallop myosin at 2 A resolution: implications for regulation". Structure. 4 (1): 21–32. doi:10.1016/S0969-2126(96)00006-8. PMID 8805510.
  2. ^ Rhoads AR, Friedberg F (April 1997). "Sequence motifs for calmodulin recognition". FASEB J. 11 (5): 331–40. doi:10.1096/fasebj.11.5.9141499. PMID 9141499. S2CID 1877645.
  3. ^ Xie X, Harrison DH, Schlichting I, Sweet RM, Kalabokis VN, Szent-Györgyi AG, Cohen C (March 1994). "Structure of the regulatory domain of scallop myosin at 2.8 A resolution". Nature. 368 (6469): 306–12. Bibcode:1994Natur.368..306X. doi:10.1038/368306a0. PMID 8127365. S2CID 4279198.
This article incorporates text from the public domain Pfam and InterPro: IPR000048