Hyphomicrobiaceae

Hyphomicrobiaceae
	Three representative cell types of a culture of Hyphomicrobium sp.. Note short processes on two of the three cells, thought to be remnants of the former mother hypha
Scientific classification
Domain:	Bacteria
Phylum:	Pseudomonadota
Class:	Alphaproteobacteria
Order:	Hyphomicrobiales
Family:	Hyphomicrobiaceae; Babudieri 1950
Genera
	Caenibius Hördt et al. 2020; Dichotomicrobium Hirsch and Hoffmann 1989; Filomicrobium Schlesner 1988; Hyphomicrobium Stutzer and Hartleb 1899 (Approved Lists 1980); Limoniibacter Li et al. 2019; Methyloceanibacter Takeuchi et al. 2014; Methyloligella Doronina et al. 2014; Pedomicrobium Aristovskaya 1961 (Approved Lists 1980); Prosthecomicrobium Staley 1968 (Approved Lists 1980); Rhodomicrobium Duchow and Douglas 1949 (Approved Lists 1980); Seliberia Aristovskaya and Parinkina 1963 (Approved Lists 1980);
Synonyms
	"Methyloligellaceae" Yarza et al. 2014; "Rhodomicrobiaceae" Yarza et al. 2014;

The Hyphomicrobiaceae are a family of bacteria. Among others, they include Rhodomicrobium, a genus of purple bacteria.

Phylogeny edit

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN).^[3] The phylogeny is based on whole-genome analysis.^[4]

Hyphomicrobiaceae

	Dichotomicrobium

	Rhodomicrobium

	Methyloligella

	Methyloceanibacter

	Filomicrobium

	Pedomicrobium

outgroup

Parvibaculaceae

References edit

^ Takeuchi M, Katayama T, Yamagishi T, Hanada S, Tamaki H, Kamagata Y, Oshima K, Hattori M, Marumo K, Nedachi M, Maeda H, Suwa Y, Sakata S (2014). "Methyloceanibacter caenitepidi gen. nov., sp. nov., a facultatively methylotrophic bacterium isolated from marine sediments near a hydrothermal vent". Int J Syst Evol Microbiol. 64 (Pt 2): 462–468. doi:10.1099/ijs.0.053397-0. PMID 24096357.
^ Doronina NV, Poroshina MN, Kaparullina EN, Ezhov VA, Trotsenko YA (2013). "Methyloligella halotolerans gen. nov., sp. nov. and Methyloligella solikamskensis sp. nov., two non-pigmented halotolerant obligately methylotrophic bacteria isolated from the Ural saline environments". Syst Appl Microbiol. 36 (3): 148–154. doi:10.1016/j.syapm.2012.12.001. PMID 23351489.
^ ^a ^b Euzéby JP, Parte AC. "Hyphomicrobiaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 15 May 2021.
^ ^a ^b Hördt A, García López M, Meier-Kolthoff JP, Schleuning M, Weinhold LM, Tindall BJ, Gronow A, Kyrpides NC, Woyke T, Göker M (2020). "Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria". Front. Microbiol. 11: 468. doi:10.3389/fmicb.2020.00468. PMC 7179689. PMID 32373076.
^ ^a ^b Yarza P, Yilmaz P, Pruesse E, Glöckner FO, Ludwig W, Schleifer KH, Whitman WB, Euzéby J, Amann R, Rosselló-Móra R (2014). "Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences". Nat Rev Microbiol. 12 (9): 635–45. doi:10.1038/nrmicro3330. hdl:10261/123763. PMID 25118885. S2CID 21895693.

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[1] Takeuchi M, Katayama T, Yamagishi T, Hanada S, Tamaki H, Kamagata Y, Oshima K, Hattori M, Marumo K, Nedachi M, Maeda H, Suwa Y, Sakata S (2014). "Methyloceanibacter caenitepidi gen. nov., sp. nov., a facultatively methylotrophic bacterium isolated from marine sediments near a hydrothermal vent". Int J Syst Evol Microbiol. 64 (Pt 2): 462–468. doi:10.1099/ijs.0.053397-0. PMID 24096357.

[2] Doronina NV, Poroshina MN, Kaparullina EN, Ezhov VA, Trotsenko YA (2013). "Methyloligella halotolerans gen. nov., sp. nov. and Methyloligella solikamskensis sp. nov., two non-pigmented halotolerant obligately methylotrophic bacteria isolated from the Ural saline environments". Syst Appl Microbiol. 36 (3): 148–154. doi:10.1016/j.syapm.2012.12.001. PMID 23351489.

[LPSN-3] Euzéby JP, Parte AC. "Hyphomicrobiaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 15 May 2021.

[Hördt-4] Hördt A, García López M, Meier-Kolthoff JP, Schleuning M, Weinhold LM, Tindall BJ, Gronow A, Kyrpides NC, Woyke T, Göker M (2020). "Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria". Front. Microbiol. 11: 468. doi:10.3389/fmicb.2020.00468. PMC 7179689. PMID 32373076.

[Yarza-5] Yarza P, Yilmaz P, Pruesse E, Glöckner FO, Ludwig W, Schleifer KH, Whitman WB, Euzéby J, Amann R, Rosselló-Móra R (2014). "Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences". Nat Rev Microbiol. 12 (9): 635–45. doi:10.1038/nrmicro3330. hdl:10261/123763. PMID 25118885. S2CID 21895693.

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